STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR03609.1ApaG; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)    
Predicted Functional Partners:
AJR03171.1
SprA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.991
AJR02515.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.795
AJR03325.1
Gliding motility protein GldB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
AJR02851.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
AJR04554.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
AJR02517.1
Gliding motility protein GldJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
AJR03595.1
PorT protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.755
AJR02676.1
Gliding motility protein GldD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
AJR03352.1
Gliding motility protein Gldk; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.736
AJR04127.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.703
Your Current Organism:
Siansivirga zeaxanthinifaciens
NCBI taxonomy Id: 1454006
Other names: S. zeaxanthinifaciens CC-SAMT-1, Siansivirga zeaxanthinifaciens CC-SAMT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.