STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMS_0569NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (447 aa)    
Predicted Functional Partners:
NMS_0205
Citrate synthase; Belongs to the citrate synthase family.
   
 0.918
NMS_1927
Glycine dehydrogenase; Belongs to the GcvP family.
   
 0.912
NMS_1092
2-oxoglutarate dehydrogenase E1 component.
   
 0.909
NMS_0348
Nitrilase.
   
 
 0.906
NMS_0871
Omega amidase.
   
 
 0.906
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
   
 
 0.904
NMS_1608
Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase.
   
 
 0.901
NMS_1884
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit.
  
 
 0.901
NMS_1313
Delta-1-pyrroline-5-carboxylate dehydrogenase.
   
  0.899
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
  
 
 0.898
Your Current Organism:
Nonlabens marinus
NCBI taxonomy Id: 1454201
Other names: Flavobacteria bacterium S1-08, N. marinus S1-08, Nonlabens marinus S1-08
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.