STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMU_11320Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)    
Predicted Functional Partners:
ACMU_11315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.828
ACMU_09345
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.683
ACMU_00470
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.681
ACMU_11310
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.680
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
  0.581
ACMU_00505
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
  0.557
ACMU_14315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.557
ACMU_18150
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.548
ACMU_11305
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.536
ACMU_11300
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.498
Your Current Organism:
Actibacterium mucosum
NCBI taxonomy Id: 1454373
Other names: A. mucosum KCTC 23349, Actibacterium mucosum CECT 7668, Actibacterium mucosum KCTC 23349, alpha proteobacterium CECT 7668
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.