Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SD78_0158 | SD78_0159 | Hypothetical protein. | Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.932 |
SD78_0158 | SD78_0160 | Hypothetical protein. | Hypothetical protein. | 0.809 |
SD78_0158 | SD78_0161 | Hypothetical protein. | Hypothetical protein. | 0.791 |
SD78_0158 | SD78_0163 | Hypothetical protein. | UPF0047 protein Bsu YugU. | 0.503 |
SD78_0158 | SD78_3336 | Hypothetical protein. | Putative acetyltransferase. | 0.425 |
SD78_0158 | SD78_3361 | Hypothetical protein. | Ferrous iron transport permease EfeU. | 0.448 |
SD78_0159 | SD78_0158 | Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein. | 0.932 |
SD78_0159 | SD78_0160 | Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein. | 0.809 |
SD78_0159 | SD78_0161 | Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein. | 0.791 |
SD78_0159 | SD78_0163 | Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | UPF0047 protein Bsu YugU. | 0.484 |
SD78_0160 | SD78_0158 | Hypothetical protein. | Hypothetical protein. | 0.809 |
SD78_0160 | SD78_0159 | Hypothetical protein. | Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.809 |
SD78_0160 | SD78_0161 | Hypothetical protein. | Hypothetical protein. | 0.791 |
SD78_0160 | SD78_0163 | Hypothetical protein. | UPF0047 protein Bsu YugU. | 0.484 |
SD78_0161 | SD78_0158 | Hypothetical protein. | Hypothetical protein. | 0.791 |
SD78_0161 | SD78_0159 | Hypothetical protein. | Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.791 |
SD78_0161 | SD78_0160 | Hypothetical protein. | Hypothetical protein. | 0.791 |
SD78_0161 | SD78_0163 | Hypothetical protein. | UPF0047 protein Bsu YugU. | 0.497 |
SD78_0163 | SD78_0158 | UPF0047 protein Bsu YugU. | Hypothetical protein. | 0.503 |
SD78_0163 | SD78_0159 | UPF0047 protein Bsu YugU. | Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.484 |
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