Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SD78_0366Flagellar biosynthesis protein FliS. (134 aa)    
Predicted Functional Partners:
SD78_0365
Flagellar protein.
  
  
 0.998
SD78_0399
Flagellar hook-associated protein FliD.
 
 
 0.998
SD78_0422
Flagellin protein FlaA.
 
 
 0.993
flgK
Flagellar hook-associated protein FlgK.
 
 
 0.993
SD78_0426
Flagellar hook-associated protein FlgL.
 
 
 0.992
SD78_3768
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
  
 0.987
SD78_0367
Flagellar protein YvyC.
 
  
 0.986
SD78_0421
Flagellin protein FlaA; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.982
SD78_1243
Flagellin protein FlaA.
 
 
 0.982
SD78_3759
Flagellum-specific ATP synthase FliI.
 
 
 0.982
Your Current Organism:
Bacillus badius
NCBI taxonomy Id: 1455
Other names: ATCC 14574, B. badius, Bacillus encimensis, Bacillus encimensis Dastager et al. 2015, Bacillus sp. SGD-V-25, CCUG 7412, CIP 58.52, DSM 23, DSM 28241 [[Bacillus encimensis]], IFO 15713, JCM 12228, LMG 7122, LMG:7122, NBRC 15713, NCIB 9364, NCIB:9364, NCIM 5513, NCTC 10333, NRRL NRS-663, VKM B-496, strain SGD-V-25 [[Bacillus encimensis]]
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