Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SD78_0316 | SD78_0369 | SD78_0316 | SD78_0369 | Glutaredoxin. | Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. | 0.571 |
SD78_0316 | SD78_0792 | SD78_0316 | SD78_0792 | Glutaredoxin. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.606 |
SD78_0316 | SD78_3583 | SD78_0316 | SD78_3583 | Glutaredoxin. | Glutaredoxin family protein. | 0.747 |
SD78_0316 | SD78_3590 | SD78_0316 | SD78_3590 | Glutaredoxin. | Alkyl hydroperoxide reductase subunit C-like protein. | 0.580 |
SD78_0316 | SD78_4209 | SD78_0316 | SD78_4209 | Glutaredoxin. | Gamma-glutamyltranspeptidase. | 0.650 |
SD78_0316 | msrA | SD78_0316 | SD78_1528 | Glutaredoxin. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.843 |
SD78_0316 | msrA-2 | SD78_0316 | SD78_2113 | Glutaredoxin. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.843 |
SD78_0316 | msrB | SD78_0316 | SD78_0841 | Glutaredoxin. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.843 |
SD78_0369 | SD78_0316 | SD78_0369 | SD78_0316 | Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. | Glutaredoxin. | 0.571 |
SD78_0369 | SD78_0792 | SD78_0369 | SD78_0792 | Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.736 |
SD78_0369 | SD78_1913 | SD78_0369 | SD78_1913 | Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. | Hypothetical protein. | 0.564 |
SD78_0369 | SD78_3583 | SD78_0369 | SD78_3583 | Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. | Glutaredoxin family protein. | 0.551 |
SD78_0369 | SD78_3590 | SD78_0369 | SD78_3590 | Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. | Alkyl hydroperoxide reductase subunit C-like protein. | 0.732 |
SD78_0369 | SD78_4209 | SD78_0369 | SD78_4209 | Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. | Gamma-glutamyltranspeptidase. | 0.568 |
SD78_0369 | guaA | SD78_0369 | SD78_4392 | Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.563 |
SD78_0369 | msrA | SD78_0369 | SD78_1528 | Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.636 |
SD78_0369 | msrA-2 | SD78_0369 | SD78_2113 | Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.636 |
SD78_0369 | msrB | SD78_0369 | SD78_0841 | Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.636 |
SD78_0792 | SD78_0316 | SD78_0792 | SD78_0316 | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | Glutaredoxin. | 0.606 |
SD78_0792 | SD78_0369 | SD78_0792 | SD78_0369 | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family. | 0.736 |
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