STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SD78_0534Hypothetical protein. (124 aa)    
Predicted Functional Partners:
SD78_3627
Cytochrome c oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.972
SD78_0353
Cytochrome c551.
  
 0.956
SD78_2401
Membrane-attached cytochrome c550.
  
 0.956
SD78_4237
Quinohemoprotein amine dehydrogenase 60 kDa subunit.
  
 0.956
SD78_2488
Hypothetical protein.
 
   0.734
SD78_4265
Rieske [2Fe-2S] iron-sulfur protein.
  
 
 0.721
SD78_2192
Menaquinone-cytochrome C reductase iron-sulfur subunit.
  
 
 0.696
SD78_1647
Hypothetical protein.
  
   0.668
SD78_2190
Menaquinone-cytochrome C oxidoreductase, cytochrome C subunit; Component of the menaquinol-cytochrome c reductase complex.
  
   0.668
SD78_2191
Menaquinone-cytochrome c reductase, cytochrome B subunit.
  
   0.668
Your Current Organism:
Bacillus badius
NCBI taxonomy Id: 1455
Other names: ATCC 14574, B. badius, Bacillus encimensis, Bacillus encimensis Dastager et al. 2015, Bacillus sp. SGD-V-25, CCUG 7412, CIP 58.52, DSM 23, DSM 28241 [[Bacillus encimensis]], IFO 15713, JCM 12228, LMG 7122, LMG:7122, NBRC 15713, NCIB 9364, NCIB:9364, NCIM 5513, NCTC 10333, NRRL NRS-663, VKM B-496, strain SGD-V-25 [[Bacillus encimensis]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.