Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SD78_0065 | SD78_0544 | SD78_0065 | SD78_0544 | Hypothetical protein. | Cytochrome d ubiquinol oxidase subunit II. | 0.597 |
SD78_0065 | SD78_2592 | SD78_0065 | SD78_2592 | Hypothetical protein. | Succinate dehydrogenase cytochrome b558 subunit. | 0.700 |
SD78_0065 | SD78_4172 | SD78_0065 | SD78_4172 | Hypothetical protein. | Hypothetical protein. | 0.412 |
SD78_0065 | sdhA | SD78_0065 | SD78_2591 | Hypothetical protein. | Succinate dehydrogenase flavoprotein subunit. | 0.429 |
SD78_0065 | sdhB | SD78_0065 | SD78_2590 | Hypothetical protein. | Succinate dehydrogenase iron-sulfur protein. | 0.431 |
SD78_0544 | SD78_0065 | SD78_0544 | SD78_0065 | Cytochrome d ubiquinol oxidase subunit II. | Hypothetical protein. | 0.597 |
SD78_0544 | SD78_0545 | SD78_0544 | SD78_0545 | Cytochrome d ubiquinol oxidase subunit II. | Cytochrome d ubiquinol oxidase subunit I. | 0.992 |
SD78_0544 | SD78_0835 | SD78_0544 | SD78_0835 | Cytochrome d ubiquinol oxidase subunit II. | Cytochrome d ubiquinol oxidase subunit I. | 0.950 |
SD78_0544 | SD78_1476 | SD78_0544 | SD78_1476 | Cytochrome d ubiquinol oxidase subunit II. | Hypothetical protein. | 0.878 |
SD78_0544 | SD78_1477 | SD78_0544 | SD78_1477 | Cytochrome d ubiquinol oxidase subunit II. | Cytochrome c family protein. | 0.878 |
SD78_0544 | SD78_2592 | SD78_0544 | SD78_2592 | Cytochrome d ubiquinol oxidase subunit II. | Succinate dehydrogenase cytochrome b558 subunit. | 0.739 |
SD78_0544 | SD78_3592 | SD78_0544 | SD78_3592 | Cytochrome d ubiquinol oxidase subunit II. | Cytochrome d ubiquinol oxidase subunit I. | 0.967 |
SD78_0544 | SD78_4172 | SD78_0544 | SD78_4172 | Cytochrome d ubiquinol oxidase subunit II. | Hypothetical protein. | 0.606 |
SD78_0544 | sdhA | SD78_0544 | SD78_2591 | Cytochrome d ubiquinol oxidase subunit II. | Succinate dehydrogenase flavoprotein subunit. | 0.664 |
SD78_0544 | sdhB | SD78_0544 | SD78_2590 | Cytochrome d ubiquinol oxidase subunit II. | Succinate dehydrogenase iron-sulfur protein. | 0.687 |
SD78_0545 | SD78_0544 | SD78_0545 | SD78_0544 | Cytochrome d ubiquinol oxidase subunit I. | Cytochrome d ubiquinol oxidase subunit II. | 0.992 |
SD78_0545 | SD78_0835 | SD78_0545 | SD78_0835 | Cytochrome d ubiquinol oxidase subunit I. | Cytochrome d ubiquinol oxidase subunit I. | 0.403 |
SD78_0545 | SD78_2592 | SD78_0545 | SD78_2592 | Cytochrome d ubiquinol oxidase subunit I. | Succinate dehydrogenase cytochrome b558 subunit. | 0.602 |
SD78_0545 | sdhA | SD78_0545 | SD78_2591 | Cytochrome d ubiquinol oxidase subunit I. | Succinate dehydrogenase flavoprotein subunit. | 0.613 |
SD78_0545 | sdhB | SD78_0545 | SD78_2590 | Cytochrome d ubiquinol oxidase subunit I. | Succinate dehydrogenase iron-sulfur protein. | 0.613 |
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