Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SD78_0065 | SD78_0630 | SD78_0065 | SD78_0630 | Hypothetical protein. | Hypothetical protein. | 0.661 |
SD78_0065 | SD78_1039 | SD78_0065 | SD78_1039 | Hypothetical protein. | Transcription regulator. | 0.759 |
SD78_0065 | SD78_2133 | SD78_0065 | SD78_2133 | Hypothetical protein. | PBS lyase HEAT-like repeat domain protein. | 0.686 |
SD78_0065 | SD78_3619 | SD78_0065 | SD78_3619 | Hypothetical protein. | Hypothetical protein. | 0.678 |
SD78_0065 | hpr | SD78_0065 | SD78_3232 | Hypothetical protein. | Protease production regulatory protein Hpr (ScoC); Negative regulator of protease production and sporulation. | 0.556 |
SD78_0630 | SD78_0065 | SD78_0630 | SD78_0065 | Hypothetical protein. | Hypothetical protein. | 0.661 |
SD78_0630 | SD78_1039 | SD78_0630 | SD78_1039 | Hypothetical protein. | Transcription regulator. | 0.764 |
SD78_0630 | SD78_2133 | SD78_0630 | SD78_2133 | Hypothetical protein. | PBS lyase HEAT-like repeat domain protein. | 0.684 |
SD78_0630 | SD78_3231 | SD78_0630 | SD78_3231 | Hypothetical protein. | Hypothetical protein. | 0.690 |
SD78_0630 | SD78_3308 | SD78_0630 | SD78_3308 | Hypothetical protein. | Hypothetical protein. | 0.692 |
SD78_0630 | SD78_3613 | SD78_0630 | SD78_3613 | Hypothetical protein. | Hypothetical protein. | 0.692 |
SD78_0630 | SD78_3619 | SD78_0630 | SD78_3619 | Hypothetical protein. | Hypothetical protein. | 0.725 |
SD78_0630 | SD78_3630 | SD78_0630 | SD78_3630 | Hypothetical protein. | Cytochrome c oxidase, subunit IV. | 0.649 |
SD78_0630 | SD78_4066 | SD78_0630 | SD78_4066 | Hypothetical protein. | Hypothetical protein. | 0.620 |
SD78_0630 | hpr | SD78_0630 | SD78_3232 | Hypothetical protein. | Protease production regulatory protein Hpr (ScoC); Negative regulator of protease production and sporulation. | 0.630 |
SD78_1039 | SD78_0065 | SD78_1039 | SD78_0065 | Transcription regulator. | Hypothetical protein. | 0.759 |
SD78_1039 | SD78_0630 | SD78_1039 | SD78_0630 | Transcription regulator. | Hypothetical protein. | 0.764 |
SD78_1039 | SD78_2133 | SD78_1039 | SD78_2133 | Transcription regulator. | PBS lyase HEAT-like repeat domain protein. | 0.563 |
SD78_1039 | SD78_3308 | SD78_1039 | SD78_3308 | Transcription regulator. | Hypothetical protein. | 0.447 |
SD78_1039 | SD78_3613 | SD78_1039 | SD78_3613 | Transcription regulator. | Hypothetical protein. | 0.703 |
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