STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SD78_0799Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family. (266 aa)    
Predicted Functional Partners:
SD78_0800
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
     0.989
SD78_0803
Carbon monoxide dehydrogenase medium chain.
 
 
 0.984
SD78_0798
CTP:molybdopterin cytidylyltransferase.
 
 
 0.982
SD78_0804
Carbon monoxide dehydrogenase large chain.
 
 
 0.960
SD78_0805
Carbon monoxide dehydrogenase small chain.
 
 
 0.960
SD78_0801
Carbon monoxide oxidation accessory protein CoxE.
 
     0.919
SD78_0802
Carbon monoxide dehydrogenase D protein.
 
     0.855
SD78_0806
Carbon monoxide oxidation accessory protein CoxG.
 
     0.788
SD78_4283
Adenine deaminase.
 
  
  0.692
SD78_1617
Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.614
Your Current Organism:
Bacillus badius
NCBI taxonomy Id: 1455
Other names: ATCC 14574, B. badius, Bacillus encimensis, Bacillus encimensis Dastager et al. 2015, Bacillus sp. SGD-V-25, CCUG 7412, CIP 58.52, DSM 23, DSM 28241 [[Bacillus encimensis]], IFO 15713, JCM 12228, LMG 7122, LMG:7122, NBRC 15713, NCIB 9364, NCIB:9364, NCIM 5513, NCTC 10333, NRRL NRS-663, VKM B-496, strain SGD-V-25 [[Bacillus encimensis]]
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