ychF protein (Bacillus badius) - STRING interaction network

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Score

ychF

GTP-binding and nucleic acid-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (366 aa)

Predicted Functional Partners:

pth

0.916

lepA

0.881

prfA

0.860

guaA

0.850

pheT

0.847

metG

0.830

rpsG

0.813

pyrG

0.785

argS

0.743

leuS

0.743

Your Current Organism:

Bacillus badius

NCBI taxonomy Id: 1455
Other names: ATCC 14574, B. badius, Bacillus encimensis, Bacillus encimensis Dastager et al. 2015, Bacillus sp. SGD-V-25, CCUG 7412, CIP 58.52, DSM 23, DSM 28241 [[Bacillus encimensis]], IFO 15713, JCM 12228, LMG 7122, LMG:7122, NBRC 15713, NCIB 9364, NCIB:9364, NCIM 5513, NCTC 10333, NRRL NRS-663, VKM B-496, strain SGD-V-25 [[Bacillus encimensis]]

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
argS	guaA	SD78_0270	SD78_4392	Arginyl-tRNA synthetase.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.981
argS	lepA	SD78_0270	SD78_2439	Arginyl-tRNA synthetase.	Translation elongation factor LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.	0.702
argS	leuS	SD78_0270	SD78_2775	Arginyl-tRNA synthetase.	Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.891
argS	metG	SD78_0270	SD78_1152	Arginyl-tRNA synthetase.	Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.943
argS	pheT	SD78_0270	SD78_2613	Arginyl-tRNA synthetase.	Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	0.847
argS	prfA	SD78_0270	SD78_0668	Arginyl-tRNA synthetase.	Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.	0.614
argS	pyrG	SD78_0270	SD78_0682	Arginyl-tRNA synthetase.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	0.799
argS	rpsG	SD78_0270	SD78_1110	Arginyl-tRNA synthetase.	SSU ribosomal protein S7p (S5e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.740
argS	ychF	SD78_0270	SD78_0899	Arginyl-tRNA synthetase.	GTP-binding and nucleic acid-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.	0.743
guaA	argS	SD78_4392	SD78_0270	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Arginyl-tRNA synthetase.	0.981
guaA	lepA	SD78_4392	SD78_2439	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Translation elongation factor LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.	0.660
guaA	leuS	SD78_4392	SD78_2775	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.661
guaA	metG	SD78_4392	SD78_1152	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.890
guaA	pheT	SD78_4392	SD78_2613	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	0.945
guaA	pth	SD78_4392	SD78_1168	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.	0.619
guaA	pyrG	SD78_4392	SD78_0682	GMP synthase; Catalyzes the synthesis of GMP from XMP.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.	0.986
guaA	rpsG	SD78_4392	SD78_1110	GMP synthase; Catalyzes the synthesis of GMP from XMP.	SSU ribosomal protein S7p (S5e); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.810
guaA	ychF	SD78_4392	SD78_0899	GMP synthase; Catalyzes the synthesis of GMP from XMP.	GTP-binding and nucleic acid-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.	0.850
lepA	argS	SD78_2439	SD78_0270	Translation elongation factor LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.	Arginyl-tRNA synthetase.	0.702
lepA	guaA	SD78_2439	SD78_4392	Translation elongation factor LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.660

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