Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SD78_1174 | SD78_1273 | SD78_1174 | SD78_1273 | Nucleoside triphosphate pyrophosphohydrolase MazG. | Hypothetical protein. | 0.494 |
SD78_1174 | SD78_2501 | SD78_1174 | SD78_2501 | Nucleoside triphosphate pyrophosphohydrolase MazG. | GTP pyrophosphokinase, (p)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.729 |
SD78_1174 | SD78_2729 | SD78_1174 | SD78_2729 | Nucleoside triphosphate pyrophosphohydrolase MazG. | GGDEF family protein. | 0.652 |
SD78_1174 | SD78_2833 | SD78_1174 | SD78_2833 | Nucleoside triphosphate pyrophosphohydrolase MazG. | Serine/threonine protein kinase PrkC. | 0.971 |
SD78_1174 | SD78_3000 | SD78_1174 | SD78_3000 | Nucleoside triphosphate pyrophosphohydrolase MazG. | Sensory box histidine kinase/response regulator. | 0.786 |
SD78_1174 | SD78_4259 | SD78_1174 | SD78_4259 | Nucleoside triphosphate pyrophosphohydrolase MazG. | Two-component sensor histidine kinase. | 0.695 |
SD78_1272 | SD78_1273 | SD78_1272 | SD78_1273 | Hypothetical protein. | Hypothetical protein. | 0.450 |
SD78_1272 | SD78_1274 | SD78_1272 | SD78_1274 | Hypothetical protein. | Hypothetical protein. | 0.450 |
SD78_1273 | SD78_1174 | SD78_1273 | SD78_1174 | Hypothetical protein. | Nucleoside triphosphate pyrophosphohydrolase MazG. | 0.494 |
SD78_1273 | SD78_1272 | SD78_1273 | SD78_1272 | Hypothetical protein. | Hypothetical protein. | 0.450 |
SD78_1273 | SD78_1274 | SD78_1273 | SD78_1274 | Hypothetical protein. | Hypothetical protein. | 0.809 |
SD78_1273 | SD78_2501 | SD78_1273 | SD78_2501 | Hypothetical protein. | GTP pyrophosphokinase, (p)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.572 |
SD78_1273 | SD78_2729 | SD78_1273 | SD78_2729 | Hypothetical protein. | GGDEF family protein. | 0.626 |
SD78_1273 | SD78_2833 | SD78_1273 | SD78_2833 | Hypothetical protein. | Serine/threonine protein kinase PrkC. | 0.686 |
SD78_1273 | SD78_3000 | SD78_1273 | SD78_3000 | Hypothetical protein. | Sensory box histidine kinase/response regulator. | 0.495 |
SD78_1273 | SD78_4259 | SD78_1273 | SD78_4259 | Hypothetical protein. | Two-component sensor histidine kinase. | 0.631 |
SD78_1273 | mnmE | SD78_1273 | SD78_0910 | Hypothetical protein. | GTPase and tRNA-U34 5-formylation enzyme TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.706 |
SD78_1273 | mnmG | SD78_1273 | SD78_0909 | Hypothetical protein. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.650 |
SD78_1274 | SD78_1272 | SD78_1274 | SD78_1272 | Hypothetical protein. | Hypothetical protein. | 0.450 |
SD78_1274 | SD78_1273 | SD78_1274 | SD78_1273 | Hypothetical protein. | Hypothetical protein. | 0.809 |
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