Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SD78_0749 | SD78_1701 | SD78_0749 | SD78_1701 | Phosphodiesterase. | Hypothetical protein. | 0.860 |
SD78_0749 | SD78_2107 | SD78_0749 | SD78_2107 | Phosphodiesterase. | Phosphodiesterase. | 0.999 |
SD78_0749 | SD78_2633 | SD78_0749 | SD78_2633 | Phosphodiesterase. | Two-component hybrid sensor and regulator. | 0.999 |
SD78_0749 | SD78_2729 | SD78_0749 | SD78_2729 | Phosphodiesterase. | GGDEF family protein. | 0.999 |
SD78_0749 | SD78_2779 | SD78_0749 | SD78_2779 | Phosphodiesterase. | TPR domain protein. | 0.995 |
SD78_0749 | SD78_2833 | SD78_0749 | SD78_2833 | Phosphodiesterase. | Serine/threonine protein kinase PrkC. | 0.999 |
SD78_0749 | SD78_3000 | SD78_0749 | SD78_3000 | Phosphodiesterase. | Sensory box histidine kinase/response regulator. | 0.999 |
SD78_0749 | guaA | SD78_0749 | SD78_4392 | Phosphodiesterase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.760 |
SD78_1456 | SD78_1701 | SD78_1456 | SD78_1701 | Hypothetical protein. | Hypothetical protein. | 0.861 |
SD78_1456 | SD78_2779 | SD78_1456 | SD78_2779 | Hypothetical protein. | TPR domain protein. | 0.878 |
SD78_1456 | SD78_2833 | SD78_1456 | SD78_2833 | Hypothetical protein. | Serine/threonine protein kinase PrkC. | 0.401 |
SD78_1701 | SD78_0749 | SD78_1701 | SD78_0749 | Hypothetical protein. | Phosphodiesterase. | 0.860 |
SD78_1701 | SD78_1456 | SD78_1701 | SD78_1456 | Hypothetical protein. | Hypothetical protein. | 0.861 |
SD78_1701 | SD78_2107 | SD78_1701 | SD78_2107 | Hypothetical protein. | Phosphodiesterase. | 0.711 |
SD78_1701 | SD78_2633 | SD78_1701 | SD78_2633 | Hypothetical protein. | Two-component hybrid sensor and regulator. | 0.725 |
SD78_1701 | SD78_2639 | SD78_1701 | SD78_2639 | Hypothetical protein. | Ankyrin repeat protein. | 0.788 |
SD78_1701 | SD78_2729 | SD78_1701 | SD78_2729 | Hypothetical protein. | GGDEF family protein. | 0.701 |
SD78_1701 | SD78_2779 | SD78_1701 | SD78_2779 | Hypothetical protein. | TPR domain protein. | 0.878 |
SD78_1701 | SD78_2833 | SD78_1701 | SD78_2833 | Hypothetical protein. | Serine/threonine protein kinase PrkC. | 0.945 |
SD78_1701 | SD78_3000 | SD78_1701 | SD78_3000 | Hypothetical protein. | Sensory box histidine kinase/response regulator. | 0.784 |
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