Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SD78_0761 | SD78_1055 | Lipase/Acylhydrolase. | Potassium channel protein. | 0.409 |
SD78_0761 | SD78_1736 | Lipase/Acylhydrolase. | Hypothetical protein. | 0.418 |
SD78_0761 | SD78_1899 | Lipase/Acylhydrolase. | Pentapeptide repeat domain protein. | 0.409 |
SD78_0761 | SD78_2082 | Lipase/Acylhydrolase. | Hypothetical protein. | 0.409 |
SD78_0761 | SD78_2894 | Lipase/Acylhydrolase. | Oxetanocin A resistance protein. | 0.409 |
SD78_1055 | SD78_0761 | Potassium channel protein. | Lipase/Acylhydrolase. | 0.409 |
SD78_1055 | SD78_1736 | Potassium channel protein. | Hypothetical protein. | 0.418 |
SD78_1055 | SD78_2046 | Potassium channel protein. | 5'-nucleotidase. | 0.409 |
SD78_1736 | SD78_0761 | Hypothetical protein. | Lipase/Acylhydrolase. | 0.418 |
SD78_1736 | SD78_1055 | Hypothetical protein. | Potassium channel protein. | 0.418 |
SD78_1736 | SD78_1737 | Hypothetical protein. | Hypothetical protein. | 0.584 |
SD78_1736 | SD78_1738 | Hypothetical protein. | Transcriptional regulator, MerR family. | 0.519 |
SD78_1736 | SD78_1739 | Hypothetical protein. | Membrane protein. | 0.463 |
SD78_1736 | SD78_1899 | Hypothetical protein. | Pentapeptide repeat domain protein. | 0.418 |
SD78_1736 | SD78_2046 | Hypothetical protein. | 5'-nucleotidase. | 0.418 |
SD78_1736 | SD78_2082 | Hypothetical protein. | Hypothetical protein. | 0.418 |
SD78_1736 | SD78_2894 | Hypothetical protein. | Oxetanocin A resistance protein. | 0.418 |
SD78_1736 | SD78_4044 | Hypothetical protein. | Transporter associated with VraSR. | 0.576 |
SD78_1737 | SD78_1736 | Hypothetical protein. | Hypothetical protein. | 0.584 |
SD78_1737 | SD78_1738 | Hypothetical protein. | Transcriptional regulator, MerR family. | 0.688 |
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