STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SD78_1973Hypothetical protein. (283 aa)    
Predicted Functional Partners:
SD78_1546
Hypothetical protein.
  
     0.767
SD78_4237
Quinohemoprotein amine dehydrogenase 60 kDa subunit.
  
     0.751
SD78_4236
Quinohemoprotein amine dehydrogenase gamma subunit.
  
     0.714
SD78_0871
Hypothetical protein.
  
     0.642
SD78_3024
Signal peptidase I; Belongs to the peptidase S26 family.
   
 
 0.628
SD78_3737
Signal peptidase I; Belongs to the peptidase S26 family.
   
 
 0.628
SD78_2338
Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific).
   
 
 0.591
SD78_2704
Proline dipeptidase.
   
 
 0.591
SD78_0588
WblL protein.
  
     0.569
SD78_4241
Putative protease.
  
     0.567
Your Current Organism:
Bacillus badius
NCBI taxonomy Id: 1455
Other names: ATCC 14574, B. badius, Bacillus encimensis, Bacillus encimensis Dastager et al. 2015, Bacillus sp. SGD-V-25, CCUG 7412, CIP 58.52, DSM 23, DSM 28241 [[Bacillus encimensis]], IFO 15713, JCM 12228, LMG 7122, LMG:7122, NBRC 15713, NCIB 9364, NCIB:9364, NCIM 5513, NCTC 10333, NRRL NRS-663, VKM B-496, strain SGD-V-25 [[Bacillus encimensis]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.