STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
mntRMn-dependent transcriptional regulator MntR; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family. (139 aa)    
Predicted Functional Partners:
SD78_1525
Manganese ABC transporter, inner membrane permease protein SitD.
 
 
 0.914
SD78_2389
Zinc ABC transporter, inner membrane permease protein ZnuB.
  
 
 0.861
SD78_0413
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF.
     
 0.829
SD78_3288
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
    
  0.828
SD78_1050
Dipeptide-binding ABC transporter.
   
 
 0.827
cbiM
Substrate-specific component CbiM of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
     
 0.824
SD78_1526
Manganese ABC transporter, ATP-binding protein SitB.
 
 
 0.821
SD78_1704
Phosphonate ABC transporter phosphate-binding periplasmic component.
   
 
  0.819
SD78_0412
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein.
     
  0.818
SD78_0415
ABC transporter; Belongs to the ABC transporter superfamily.
     
  0.818
Your Current Organism:
Bacillus badius
NCBI taxonomy Id: 1455
Other names: ATCC 14574, B. badius, Bacillus encimensis, Bacillus encimensis Dastager et al. 2015, Bacillus sp. SGD-V-25, CCUG 7412, CIP 58.52, DSM 23, DSM 28241 [[Bacillus encimensis]], IFO 15713, JCM 12228, LMG 7122, LMG:7122, NBRC 15713, NCIB 9364, NCIB:9364, NCIM 5513, NCTC 10333, NRRL NRS-663, VKM B-496, strain SGD-V-25 [[Bacillus encimensis]]
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