STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntRMn-dependent transcriptional regulator MntR; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family. (139 aa)    
Predicted Functional Partners:
metN
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
   0.815
SD78_1525
Manganese ABC transporter, inner membrane permease protein SitD.
 
 
 0.769
SD78_1526
Manganese ABC transporter, ATP-binding protein SitB.
 
 
 0.763
SD78_1524
Manganese ABC transporter, periplasmic-binding protein SitA; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.755
SD78_2389
Zinc ABC transporter, inner membrane permease protein ZnuB.
  
 
 0.717
SD78_4263
Zinc ABC transporter, periplasmic-binding protein ZnuA; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.685
SD78_2390
Zinc ABC transporter, ATP-binding protein ZnuC.
  
 
 0.670
SD78_4007
HTH-type transcriptional regulator pksA.
   
    0.639
SD78_1036
Cell division inhibitor.
   
    0.578
SD78_2140
Hypothetical protein.
       0.558
Your Current Organism:
Bacillus badius
NCBI taxonomy Id: 1455
Other names: ATCC 14574, B. badius, Bacillus encimensis, Bacillus encimensis Dastager et al. 2015, Bacillus sp. SGD-V-25, CCUG 7412, CIP 58.52, DSM 23, DSM 28241 [[Bacillus encimensis]], IFO 15713, JCM 12228, LMG 7122, LMG:7122, NBRC 15713, NCIB 9364, NCIB:9364, NCIM 5513, NCTC 10333, NRRL NRS-663, VKM B-496, strain SGD-V-25 [[Bacillus encimensis]]
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