Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SD78_0060 | SD78_0069 | Spore coat protein S. | Hypothetical protein. | 0.772 |
SD78_0060 | SD78_0393 | Spore coat protein S. | Protein GerPE. | 0.425 |
SD78_0060 | SD78_2270 | Spore coat protein S. | Hypothetical protein. | 0.761 |
SD78_0060 | SD78_2392 | Spore coat protein S. | Hypothetical protein. | 0.736 |
SD78_0060 | SD78_2564 | Spore coat protein S. | CotS-related protein. | 0.814 |
SD78_0060 | SD78_3194 | Spore coat protein S. | Hypothetical protein. | 0.760 |
SD78_0060 | SD78_3227 | Spore coat protein S. | Hypothetical protein. | 0.606 |
SD78_0060 | SD78_3467 | Spore coat protein S. | Hypothetical protein. | 0.753 |
SD78_0060 | SD78_3616 | Spore coat protein S. | Putative lipoprotein. | 0.720 |
SD78_0069 | SD78_0060 | Hypothetical protein. | Spore coat protein S. | 0.772 |
SD78_0069 | SD78_0393 | Hypothetical protein. | Protein GerPE. | 0.556 |
SD78_0069 | SD78_0394 | Hypothetical protein. | Protein GerPD. | 0.445 |
SD78_0069 | SD78_2270 | Hypothetical protein. | Hypothetical protein. | 0.759 |
SD78_0069 | SD78_2392 | Hypothetical protein. | Hypothetical protein. | 0.762 |
SD78_0069 | SD78_2564 | Hypothetical protein. | CotS-related protein. | 0.768 |
SD78_0069 | SD78_3194 | Hypothetical protein. | Hypothetical protein. | 0.761 |
SD78_0069 | SD78_3227 | Hypothetical protein. | Hypothetical protein. | 0.602 |
SD78_0069 | SD78_3467 | Hypothetical protein. | Hypothetical protein. | 0.753 |
SD78_0069 | SD78_3616 | Hypothetical protein. | Putative lipoprotein. | 0.738 |
SD78_0393 | SD78_0060 | Protein GerPE. | Spore coat protein S. | 0.425 |
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