Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SD78_0883 | SD78_0884 | SD78_0883 | SD78_0884 | Hypothetical protein. | YycH protein. | 0.986 |
SD78_0883 | SD78_2194 | SD78_0883 | SD78_2194 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0302 family. | 0.612 |
SD78_0883 | SD78_2358 | SD78_0883 | SD78_2358 | Hypothetical protein. | Late competence protein ComGD. | 0.616 |
SD78_0883 | SD78_2467 | SD78_0883 | SD78_2467 | Hypothetical protein. | Hypothetical protein. | 0.718 |
SD78_0883 | SD78_2581 | SD78_0883 | SD78_2581 | Hypothetical protein. | TPR repeat protein. | 0.519 |
SD78_0883 | ezrA | SD78_0883 | SD78_2726 | Hypothetical protein. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.712 |
SD78_0883 | ftsL | SD78_0883 | SD78_3661 | Hypothetical protein. | Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. | 0.615 |
SD78_0884 | SD78_0883 | SD78_0884 | SD78_0883 | YycH protein. | Hypothetical protein. | 0.986 |
SD78_0884 | SD78_2358 | SD78_0884 | SD78_2358 | YycH protein. | Late competence protein ComGD. | 0.606 |
SD78_0884 | SD78_2467 | SD78_0884 | SD78_2467 | YycH protein. | Hypothetical protein. | 0.698 |
SD78_0884 | SD78_2581 | SD78_0884 | SD78_2581 | YycH protein. | TPR repeat protein. | 0.596 |
SD78_0884 | SD78_3614 | SD78_0884 | SD78_3614 | YycH protein. | Hypothetical protein. | 0.441 |
SD78_0884 | ezrA | SD78_0884 | SD78_2726 | YycH protein. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.597 |
SD78_0884 | ftsL | SD78_0884 | SD78_3661 | YycH protein. | Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. | 0.698 |
SD78_2194 | SD78_0883 | SD78_2194 | SD78_0883 | Hypothetical protein; Belongs to the UPF0302 family. | Hypothetical protein. | 0.612 |
SD78_2194 | SD78_2371 | SD78_2194 | SD78_2371 | Hypothetical protein; Belongs to the UPF0302 family. | Hypothetical protein. | 0.683 |
SD78_2194 | SD78_2467 | SD78_2194 | SD78_2467 | Hypothetical protein; Belongs to the UPF0302 family. | Hypothetical protein. | 0.709 |
SD78_2194 | ftsL | SD78_2194 | SD78_3661 | Hypothetical protein; Belongs to the UPF0302 family. | Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. | 0.409 |
SD78_2358 | SD78_0883 | SD78_2358 | SD78_0883 | Late competence protein ComGD. | Hypothetical protein. | 0.616 |
SD78_2358 | SD78_0884 | SD78_2358 | SD78_0884 | Late competence protein ComGD. | YycH protein. | 0.606 |
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