Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SD78_2232 | SD78_3072 | SD78_2232 | SD78_3072 | D-serine/D-alanine/glycine transporter. | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | 0.402 |
SD78_3071 | SD78_3072 | SD78_3071 | SD78_3072 | Omega-amino acid--pyruvate aminotransferase. | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | 0.479 |
SD78_3072 | SD78_2232 | SD78_3072 | SD78_2232 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | D-serine/D-alanine/glycine transporter. | 0.402 |
SD78_3072 | SD78_3071 | SD78_3072 | SD78_3071 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | Omega-amino acid--pyruvate aminotransferase. | 0.479 |
SD78_3072 | SD78_3073 | SD78_3072 | SD78_3073 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | Deacetylase. | 0.554 |
SD78_3072 | SD78_3074 | SD78_3072 | SD78_3074 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | Aromatic amino acid transport protein AroP. | 0.690 |
SD78_3072 | carA | SD78_3072 | SD78_3689 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | 0.504 |
SD78_3072 | carB | SD78_3072 | SD78_3690 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.542 |
SD78_3072 | pyrB | SD78_3072 | SD78_3687 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.647 |
SD78_3072 | thiM | SD78_3072 | SD78_3529 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.403 |
SD78_3073 | SD78_3072 | SD78_3073 | SD78_3072 | Deacetylase. | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | 0.554 |
SD78_3073 | SD78_3074 | SD78_3073 | SD78_3074 | Deacetylase. | Aromatic amino acid transport protein AroP. | 0.625 |
SD78_3074 | SD78_3072 | SD78_3074 | SD78_3072 | Aromatic amino acid transport protein AroP. | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | 0.690 |
SD78_3074 | SD78_3073 | SD78_3074 | SD78_3073 | Aromatic amino acid transport protein AroP. | Deacetylase. | 0.625 |
carA | SD78_3072 | SD78_3689 | SD78_3072 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | 0.504 |
carA | carB | SD78_3689 | SD78_3690 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.999 |
carA | pyrB | SD78_3689 | SD78_3687 | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
carB | SD78_3072 | SD78_3690 | SD78_3072 | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | 0.542 |
carB | carA | SD78_3690 | SD78_3689 | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. | 0.999 |
carB | pyrB | SD78_3690 | SD78_3687 | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
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