Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SD78_3205Multimodular transpeptidase-transglycosylase. (661 aa)    
Predicted Functional Partners:
SD78_2164
Multimodular transpeptidase-transglycosylase.
  
  
 
0.918
SD78_2265
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
   
 
 0.914
SD78_1281
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
   
 
 0.910
SD78_2009
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
   
 
 0.909
SD78_2109
D-alanyl-D-alanine carboxypeptidase.
     
 0.903
SD78_2251
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
   
 
 0.902
gpsB
Cell division protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
   
 
 0.822
SD78_0192
Cell division protein FtsW; Belongs to the SEDS family.
  
 
 
 0.749
SD78_3621
Cell division protein FtsW; Belongs to the SEDS family.
  
 
 
 0.724
SD78_3682
Cell division initiation protein DivIVA.
   
 
 0.673
Your Current Organism:
Bacillus badius
NCBI taxonomy Id: 1455
Other names: ATCC 14574, B. badius, Bacillus encimensis, Bacillus encimensis Dastager et al. 2015, Bacillus sp. SGD-V-25, CCUG 7412, CIP 58.52, DSM 23, DSM 28241 [[Bacillus encimensis]], IFO 15713, JCM 12228, LMG 7122, LMG:7122, NBRC 15713, NCIB 9364, NCIB:9364, NCIM 5513, NCTC 10333, NRRL NRS-663, VKM B-496, strain SGD-V-25 [[Bacillus encimensis]]
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