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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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SD78_4100Anti-sigma F factor antagonist (spoIIAA-2); Belongs to the anti-sigma-factor antagonist family. (109 aa)    
Predicted Functional Partners:
rsbW
Serine-protein kinase RsbW; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).
 
 
 0.988
SD78_4098
Anti-sigma B factor RsbT.
 
 
 0.933
SD78_4099
Serine phosphatase RsbU, regulator of sigma subunit.
 
   
 0.933
SD78_4102
RNA polymerase sigma factor SigB; Belongs to the sigma-70 factor family.
 
  
 0.884
spoIIAB
Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
 
 
 0.784
SD78_4096
RsbR, positive regulator of sigma-B.
 
     0.771
SD78_4097
RsbS, negative regulator of sigma-B.
 
     0.767
SD78_4103
Phosphoserine phosphatase RsbX.
 
   
 0.767
SD78_0943
Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.724
SD78_4104
Transcription accessory protein.
       0.654
Your Current Organism:
Bacillus badius
NCBI taxonomy Id: 1455
Other names: ATCC 14574, B. badius, Bacillus encimensis, Bacillus encimensis Dastager et al. 2015, Bacillus sp. SGD-V-25, CCUG 7412, CIP 58.52, DSM 23, DSM 28241 [[Bacillus encimensis]], IFO 15713, JCM 12228, LMG 7122, LMG:7122, NBRC 15713, NCIB 9364, NCIB:9364, NCIM 5513, NCTC 10333, NRRL NRS-663, VKM B-496, strain SGD-V-25 [[Bacillus encimensis]]
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