Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SD78_2959 | SD78_4120 | Resolvase. | Phage-like element PBSX protein xkdE. | 0.650 |
SD78_2977 | SD78_4120 | Resolvase. | Phage-like element PBSX protein xkdE. | 0.650 |
SD78_2986 | SD78_4120 | Site-specific recombinase. | Phage-like element PBSX protein xkdE. | 0.650 |
SD78_3029 | SD78_4120 | Hypothetical protein. | Phage-like element PBSX protein xkdE. | 0.650 |
SD78_4118 | SD78_4119 | Hypothetical protein. | Phage protein. | 0.773 |
SD78_4118 | SD78_4120 | Hypothetical protein. | Phage-like element PBSX protein xkdE. | 0.773 |
SD78_4118 | SD78_4121 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SD78_4119 | SD78_4118 | Phage protein. | Hypothetical protein. | 0.773 |
SD78_4119 | SD78_4120 | Phage protein. | Phage-like element PBSX protein xkdE. | 0.810 |
SD78_4119 | SD78_4121 | Phage protein. | Hypothetical protein. | 0.784 |
SD78_4120 | SD78_2959 | Phage-like element PBSX protein xkdE. | Resolvase. | 0.650 |
SD78_4120 | SD78_2977 | Phage-like element PBSX protein xkdE. | Resolvase. | 0.650 |
SD78_4120 | SD78_2986 | Phage-like element PBSX protein xkdE. | Site-specific recombinase. | 0.650 |
SD78_4120 | SD78_3029 | Phage-like element PBSX protein xkdE. | Hypothetical protein. | 0.650 |
SD78_4120 | SD78_4118 | Phage-like element PBSX protein xkdE. | Hypothetical protein. | 0.773 |
SD78_4120 | SD78_4119 | Phage-like element PBSX protein xkdE. | Phage protein. | 0.810 |
SD78_4120 | SD78_4121 | Phage-like element PBSX protein xkdE. | Hypothetical protein. | 0.809 |
SD78_4120 | SD78_4130 | Phage-like element PBSX protein xkdE. | Phage-like element PBSX protein xkdK. | 0.729 |
SD78_4120 | SD78_4139 | Phage-like element PBSX protein xkdE. | Phage-like element PBSX protein xkdS. | 0.709 |
SD78_4120 | SD78_4141 | Phage-like element PBSX protein xkdE. | Phage-like element pbsx protein XkdT. | 0.687 |
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