Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SD78_0146 | SD78_3014 | Hypothetical protein. | CAAX amino terminal protease family protein. | 0.420 |
SD78_0146 | SD78_4335 | Hypothetical protein. | ABC transporter, permease. | 0.570 |
SD78_0264 | SD78_1894 | Oxygen-insensitive NAD(P)H nitroreductase. | TOMM biosynthesis docking scaffold (protein D). | 0.708 |
SD78_0264 | SD78_1895 | Oxygen-insensitive NAD(P)H nitroreductase. | TOMM biosynthesis cyclodehydratase (protein C). | 0.626 |
SD78_0264 | SD78_2559 | Oxygen-insensitive NAD(P)H nitroreductase. | NAD(P)H-flavin oxidoreductase; Belongs to the flavin oxidoreductase frp family. | 0.714 |
SD78_0264 | SD78_3014 | Oxygen-insensitive NAD(P)H nitroreductase. | CAAX amino terminal protease family protein. | 0.484 |
SD78_0264 | SD78_4335 | Oxygen-insensitive NAD(P)H nitroreductase. | ABC transporter, permease. | 0.699 |
SD78_1893 | SD78_1894 | TOMM biosynthesis dehydrogenase (protein B). | TOMM biosynthesis docking scaffold (protein D). | 0.970 |
SD78_1893 | SD78_1895 | TOMM biosynthesis dehydrogenase (protein B). | TOMM biosynthesis cyclodehydratase (protein C). | 0.932 |
SD78_1893 | SD78_3014 | TOMM biosynthesis dehydrogenase (protein B). | CAAX amino terminal protease family protein. | 0.484 |
SD78_1893 | SD78_4335 | TOMM biosynthesis dehydrogenase (protein B). | ABC transporter, permease. | 0.660 |
SD78_1894 | SD78_0264 | TOMM biosynthesis docking scaffold (protein D). | Oxygen-insensitive NAD(P)H nitroreductase. | 0.708 |
SD78_1894 | SD78_1893 | TOMM biosynthesis docking scaffold (protein D). | TOMM biosynthesis dehydrogenase (protein B). | 0.970 |
SD78_1894 | SD78_1895 | TOMM biosynthesis docking scaffold (protein D). | TOMM biosynthesis cyclodehydratase (protein C). | 0.943 |
SD78_1894 | SD78_2559 | TOMM biosynthesis docking scaffold (protein D). | NAD(P)H-flavin oxidoreductase; Belongs to the flavin oxidoreductase frp family. | 0.708 |
SD78_1894 | SD78_3014 | TOMM biosynthesis docking scaffold (protein D). | CAAX amino terminal protease family protein. | 0.834 |
SD78_1894 | SD78_4335 | TOMM biosynthesis docking scaffold (protein D). | ABC transporter, permease. | 0.711 |
SD78_1895 | SD78_0264 | TOMM biosynthesis cyclodehydratase (protein C). | Oxygen-insensitive NAD(P)H nitroreductase. | 0.626 |
SD78_1895 | SD78_1893 | TOMM biosynthesis cyclodehydratase (protein C). | TOMM biosynthesis dehydrogenase (protein B). | 0.932 |
SD78_1895 | SD78_1894 | TOMM biosynthesis cyclodehydratase (protein C). | TOMM biosynthesis docking scaffold (protein D). | 0.943 |
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