Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SD78_1894 | SD78_4460 | SD78_1894 | SD78_4460 | TOMM biosynthesis docking scaffold (protein D). | CAAX amino terminal protease family protein. | 0.672 |
SD78_2593 | SD78_2715 | SD78_2593 | SD78_2715 | Hypothetical protein. | Adenine-specific methyltransferase. | 0.683 |
SD78_2593 | SD78_4460 | SD78_2593 | SD78_4460 | Hypothetical protein. | CAAX amino terminal protease family protein. | 0.555 |
SD78_2715 | SD78_2593 | SD78_2715 | SD78_2593 | Adenine-specific methyltransferase. | Hypothetical protein. | 0.683 |
SD78_2715 | SD78_2754 | SD78_2715 | SD78_2754 | Adenine-specific methyltransferase. | Putative protein YtpQ; Belongs to the UPF0354 family. | 0.529 |
SD78_2715 | SD78_3303 | SD78_2715 | SD78_3303 | Adenine-specific methyltransferase. | GTP pyrophosphokinase. | 0.630 |
SD78_2715 | SD78_4460 | SD78_2715 | SD78_4460 | Adenine-specific methyltransferase. | CAAX amino terminal protease family protein. | 0.654 |
SD78_2715 | ezrA | SD78_2715 | SD78_2726 | Adenine-specific methyltransferase. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.769 |
SD78_2754 | SD78_2715 | SD78_2754 | SD78_2715 | Putative protein YtpQ; Belongs to the UPF0354 family. | Adenine-specific methyltransferase. | 0.529 |
SD78_2754 | SD78_3303 | SD78_2754 | SD78_3303 | Putative protein YtpQ; Belongs to the UPF0354 family. | GTP pyrophosphokinase. | 0.713 |
SD78_2754 | SD78_4460 | SD78_2754 | SD78_4460 | Putative protein YtpQ; Belongs to the UPF0354 family. | CAAX amino terminal protease family protein. | 0.591 |
SD78_2754 | ezrA | SD78_2754 | SD78_2726 | Putative protein YtpQ; Belongs to the UPF0354 family. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.660 |
SD78_2764 | SD78_3303 | SD78_2764 | SD78_3303 | Aminoglycoside phosphotransferase family protein. | GTP pyrophosphokinase. | 0.474 |
SD78_2764 | SD78_4460 | SD78_2764 | SD78_4460 | Aminoglycoside phosphotransferase family protein. | CAAX amino terminal protease family protein. | 0.591 |
SD78_2764 | ezrA | SD78_2764 | SD78_2726 | Aminoglycoside phosphotransferase family protein. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.442 |
SD78_3303 | SD78_2715 | SD78_3303 | SD78_2715 | GTP pyrophosphokinase. | Adenine-specific methyltransferase. | 0.630 |
SD78_3303 | SD78_2754 | SD78_3303 | SD78_2754 | GTP pyrophosphokinase. | Putative protein YtpQ; Belongs to the UPF0354 family. | 0.713 |
SD78_3303 | SD78_2764 | SD78_3303 | SD78_2764 | GTP pyrophosphokinase. | Aminoglycoside phosphotransferase family protein. | 0.474 |
SD78_3303 | SD78_4460 | SD78_3303 | SD78_4460 | GTP pyrophosphokinase. | CAAX amino terminal protease family protein. | 0.609 |
SD78_3303 | ezrA | SD78_3303 | SD78_2726 | GTP pyrophosphokinase. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.617 |
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