STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000714715_00576Unannotated protein. (163 aa)    
Predicted Functional Partners:
GCA_000714715_01022
Unannotated protein.
 
  
 0.991
GCA_000714715_02233
Unannotated protein.
  
 0.964
GCA_000714715_02613
Unannotated protein.
 
 
 0.955
GCA_000714715_03130
Unannotated protein.
    
 0.939
GCA_000714715_03103
Unannotated protein.
 
  
 0.915
GCA_000714715_00445
Unannotated protein.
  
  
 0.914
GCA_000714715_01011
Unannotated protein.
    
 0.908
GCA_000714715_02419
Unannotated protein.
    
 0.902
GCA_000714715_00316
Unannotated protein.
    
 0.894
GCA_000714715_00405
Unannotated protein.
    
 0.894
Your Current Organism:
Magnetobacterium casensis
NCBI taxonomy Id: 1455061
Other names: C. Magnetobacterium casensis, Candidatus Magnetobacterium casensis, Candidatus Magnetobacterium sp. MYR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.