STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000714715_03021Unannotated protein. (162 aa)    
Predicted Functional Partners:
GCA_000714715_03022
Unannotated protein.
 
  
 0.957
GCA_000714715_01364
Unannotated protein.
 
   
 0.669
GCA_000714715_01207
Unannotated protein.
    
 0.662
GCA_000714715_03020
Unannotated protein.
       0.615
GCA_000714715_01924
Unannotated protein.
 
 
 
 0.577
GCA_000714715_01314
Unannotated protein.
   
    0.575
GCA_000714715_00807
Unannotated protein.
 
  
 0.545
GCA_000714715_03023
Unannotated protein.
     
 0.526
GCA_000714715_01165
Unannotated protein.
  
  
 0.517
GCA_000714715_02675
Unannotated protein.
 
   
 0.499
Your Current Organism:
Magnetobacterium casensis
NCBI taxonomy Id: 1455061
Other names: C. Magnetobacterium casensis, Candidatus Magnetobacterium casensis, Candidatus Magnetobacterium sp. MYR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.