STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtCMultidrug transporter MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1009 aa)    
Predicted Functional Partners:
cnrB
Nickel and cobalt resistance protein CnrB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.981
mdtA_2
Multidrug transporter MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.732
mdtA_1
Multidrug transporter MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.684
KFB67269.1
Multidrug efflux system subunit MdtA.
  
  0.656
cusB_2
Cation efflux system protein CusB precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.653
acrA
Acriflavine resistance protein A precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.649
macA_1
Macrolide-specific efflux protein MacA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.645
KFB67270.1
Hypothetical protein.
  
  0.642
bepD
Efflux pump periplasmic linker BepD precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.641
tolC_1
Outer membrane protein TolC precursor.
  
 0.636
Your Current Organism:
Accumulibacter sp. SK01
NCBI taxonomy Id: 1457154
Other names: C. Accumulibacter sp. SK-01, Candidatus Accumulibacter sp. SK-01
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