STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFB67505.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
htpG_1
High temperature protein G; Molecular chaperone. Has ATPase activity.
   
 0.946
KFB68990.1
Putative ligase.
  
 
 0.944
hoxF
NAD-reducing hydrogenase HoxS subunit alpha.
    
   0.927
hndC_2
NADP-reducing hydrogenase subunit HndC.
    
   0.927
rplQ
50S ribosomal protein L17.
  
   0.835
rplK
50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
   
 
 0.834
rplO
50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
   
   0.833
sodB
Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.832
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
   
   0.831
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
   
   0.831
Your Current Organism:
Accumulibacter sp. SK01
NCBI taxonomy Id: 1457154
Other names: C. Accumulibacter sp. SK-01, Candidatus Accumulibacter sp. SK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.