STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZ34_04870ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1135 aa)    
Predicted Functional Partners:
AZ34_10585
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AZ34_12520
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.999
AZ34_14120
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.999
AZ34_17245
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.999
AZ34_17585
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.999
AZ34_00920
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
AZ34_12515
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
AZ34_03605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.997
AZ34_11205
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
AZ34_14360
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.997
Your Current Organism:
Hylemonella gracilis Niagara
NCBI taxonomy Id: 1458275
Other names: H. gracilis str. Niagara R, Hylemonella gracilis str. Niagara R
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