STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB_00240FtsX-like permease family protein. (794 aa)    
Predicted Functional Partners:
OSB_00230
Putative ABC transporter ATP-binding protein.
 
 
 0.999
ytrE
ABC transporter ATP-binding protein YtrE.
  
 
 0.993
lolD_1
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.993
lolD_2
Lipoprotein-releasing system ATP-binding protein LolD.
  
 
 0.993
OSB_00250
Hydroxyneurosporene synthase (CrtC).
     0.967
ttgD
Toluene efflux pump periplasmic linker protein TtgD precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.937
mdtA
Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.928
selD
Selenide, water dikinase.
 
     0.821
OSB_30370
Lipoprotein chaperone; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.794
OSB_29000
Hypothetical protein.
 
  
 0.709
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.