STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
futA1Iron uptake protein A1 precursor. (337 aa)    
Predicted Functional Partners:
cysW_1
Sulfate transport system permease protein CysW.
 
 
 0.985
fbpC2
Fe(3+) ions import ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily.
 
 
 0.957
cysW_2
Sulfate transport system permease protein CysW.
 
 
 0.925
OSB_26260
Putative binding protein component of ABC iron transporter precursor.
  
  
0.919
OSB_29700
Hypothetical protein.
  
  
 0.915
sugC_2
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 
 0.872
OSB_21380
Imelysin.
  
    0.780
hmuT
Hemin-binding periplasmic protein HmuT precursor.
  
  
 0.544
OSB_00950
N-methyltryptophan oxidase.
  
    0.534
trxB
Thioredoxin reductase.
   
  
 0.528
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.