STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadH2,4-dienoyl-CoA reductase [NADPH]. (672 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase [NADPH] large chain precursor.
  
 
 0.999
etfB_1
Electron transfer flavoprotein subunit beta.
  
 
 0.950
etfB_2
Electron transfer flavoprotein subunit beta.
  
 
 0.950
etfA_1
Electron transfer flavoprotein subunit alpha.
  
 
 0.878
etfA_2
Electron transfer flavoprotein subunit alpha.
  
 
 0.878
gltS
Ferredoxin-dependent glutamate synthase 2; Belongs to the glutamate synthase family.
  
 
 0.832
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
  
 
 0.810
fadJ
Fatty acid oxidation complex subunit alpha.
 
  
 0.807
hmp
Flavohemoprotein.
  
 0.806
OSB_01310
6-N-hydroxylaminopurine resistance protein.
       0.773
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.