STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB_01870Hypothetical protein. (122 aa)    
Predicted Functional Partners:
cobD
Threonine-phosphate decarboxylase.
 
     0.836
cbiX
Sirohydrochlorin cobaltochelatase.
 
     0.825
cobD-2
Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
       0.812
cobJ
Precorrin-3B C(17)-methyltransferase.
 
     0.779
cobL
Precorrin-6Y C(5,15)-methyltransferase.
 
     0.695
mltB_2
Membrane-bound lytic murein transglycosylase B precursor.
       0.601
yqjG
Glutathionyl-hydroquinone reductase YqjG.
       0.591
cobN
Aerobic cobaltochelatase subunit CobN.
 
     0.556
nthB_1
Nitrile hydratase subunit beta.
  
     0.549
cobI
Precorrin-2 C(20)-methyltransferase; Belongs to the precorrin methyltransferase family.
 
     0.529
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.