STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmgC_1Acyl-CoA dehydrogenase. (556 aa)    
Predicted Functional Partners:
OSB_04790
MaoC like domain protein.
 
 0.983
mutB
Methylmalonyl-CoA mutase large subunit.
 
 
 0.971
etfA_1
Electron transfer flavoprotein subunit alpha.
 
 0.863
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.860
ccrA2
Crotonyl-CoA reductase.
 
 
 0.784
etfA_2
Electron transfer flavoprotein subunit alpha.
 
 0.764
echA8_3
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.762
OSB_29290
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.676
etfB_2
Electron transfer flavoprotein subunit beta.
 
 
 0.602
etfB_1
Electron transfer flavoprotein subunit beta.
 
 
 0.597
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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