STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB_04030Cytochrome oxidase maturation protein cbb3-type. (46 aa)    
Predicted Functional Partners:
OSB_04000
Quinol dehydrogenase membrane component.
 
  
 0.977
pacS
Putative copper-transporting ATPase PacS.
 
  
 0.976
OSB_04010
FixH.
 
  
 0.975
ccoP
Cbb3-type cytochrome c oxidase subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.940
OSB_03970
Cytochrome C oxidase, mono-heme subunit/FixO.
 
  
 0.933
OSB_03960
Hypothetical protein; Cytochrome c oxidase subunit 1 homolog, bacteroid; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.917
OSB_03980
Cbb3-type cytochrome oxidase component FixQ.
 
  
 0.837
actP
Copper-transporting P-type ATPase.
  
  
 0.515
hemN_1
Oxygen-independent coproporphyrinogen-III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.471
OSB_32300
SCO1/SenC.
   
  
 0.417
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.