STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB_04770NnrU protein. (185 aa)    
Predicted Functional Partners:
OSB_04790
MaoC like domain protein.
 
    0.898
OSB_04780
Hypothetical protein.
  
    0.861
mcl2
(3S)-malyl-CoA thioesterase; Belongs to the HpcH/HpaI aldolase family.
       0.813
OSB_04750
Hypothetical protein.
       0.647
OSB_04800
Succinate dehydrogenase cytochrome b556 large membrane subunit.
  
    0.618
OSB_04810
Hypothetical protein.
  
    0.600
sdhA
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
       0.567
sdhB
Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
       0.471
OSB_02460
Hypothetical protein.
  
     0.414
OSB_04830
Hypothetical protein.
       0.404
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.