STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alsBD-allose-binding periplasmic protein precursor. (315 aa)    
Predicted Functional Partners:
rbsC_1
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 0.999
rbsA_1
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.994
rbsC_2
Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
evgS
Sensor protein EvgS precursor.
  
 
 0.965
rbsA_2
Ribose import ATP-binding protein RbsA.
 
 0.842
mglB
D-galactose-binding periplasmic protein precursor.
  
     0.677
fucU
L-fucose mutarotase; Belongs to the RbsD / FucU family.
 
   
 0.664
OSB_06440
Amidohydrolase.
 
     0.609
OSB_06530
Ureidoglycolate lyase.
       0.570
OSB_06490
2-keto-3-deoxy-L-fuconate dehydrogenase.
       0.527
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.