STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB_15020DSBA-like thioredoxin domain protein. (214 aa)    
Predicted Functional Partners:
OSB_15030
Voltage-gated potassium channel.
   
   0.826
lcfB_2
Long-chain-fatty-acid--CoA ligase.
       0.818
bcr_1
Bicyclomycin resistance protein.
  
   0.802
spxA
Regulatory protein Spx; Belongs to the ArsC family.
   
 
 0.666
OSB_09950
Putative reductase; Belongs to the ArsC family.
   
 
 0.666
arsC_2
Arsenate reductase.
   
 
 0.666
OSB_15000
Hypothetical protein.
       0.603
ctb
Group 3 truncated hemoglobin ctb.
  
  
 0.547
azr
FMN-dependent NADPH-azoreductase.
  
    0.469
aqpZ
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.465
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.