STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB_15860Hypothetical protein. (438 aa)    
Predicted Functional Partners:
acrC
Acryloyl-CoA reductase (NADH).
 
    0.806
hmp
Flavohemoprotein.
  
  
 0.787
frc
Formyl-coenzyme A transferase; Belongs to the CoA-transferase III family.
       0.776
OSB_15900
Putative cytochrome P450 124.
       0.773
puuE
4-aminobutyrate aminotransferase PuuE; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.682
dmsA
Dimethyl sulfoxide/trimethylamine N-oxide reductase precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.554
ybfK
Carboxylesterase YbfK.
       0.540
glnA2
Putative glutamine synthetase 2.
       0.521
OSB_15920
S-(hydroxymethyl)mycothiol dehydrogenase.
       0.514
guaA_3
GMP synthase.
       0.514
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.