STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iscAIron-binding protein IscA; Belongs to the HesB/IscA family. (119 aa)    
Predicted Functional Partners:
OSB_15300
Hypothetical protein.
  
  
 0.946
nifS
Cysteine desulfurase.
 
  
 0.915
OSB_17480
Hypothetical protein; TfoX N-terminal domain.
       0.855
sufB
FeS cluster assembly protein SufB.
  
 
 0.847
OSB_10470
Ferredoxin-6.
 
 
 0.819
OSB_17460
Hypothetical protein.
  
  
 0.808
iscR
HTH-type transcriptional regulator IscR.
 
  
 0.798
grxD
Glutaredoxin-4; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.730
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.706
sufC
Putative ATP-dependent transporter SufC.
  
 
 0.702
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.