STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
envZ_2Osmolarity sensor protein EnvZ. (442 aa)    
Predicted Functional Partners:
ompR_3
Transcriptional regulatory protein OmpR.
 0.984
bfmBAB
2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.945
envZ_3
Osmolarity sensor protein EnvZ.
  
  
 
0.906
ompR_1
Transcriptional regulatory protein OmpR.
 
 0.715
phoB_2
Phosphate regulon transcriptional regulatory protein PhoB.
 
 0.700
lptG
Lipopolysaccharide export system permease protein LptG.
  
     0.659
phoB_3
Phosphate regulon transcriptional regulatory protein PhoB.
 
 0.655
ctrA
Cell cycle response regulator CtrA.
 
 
 0.633
phoB_1
Phosphate regulon transcriptional regulatory protein PhoB.
 
 
 0.620
ompR_2
Transcriptional regulatory protein OmpR.
 
 0.611
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.