STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctP_3C4-dicarboxylate-binding periplasmic protein precursor. (351 aa)    
Predicted Functional Partners:
dctP_1
C4-dicarboxylate-binding periplasmic protein precursor.
  
  
 
0.924
dctP_2
C4-dicarboxylate-binding periplasmic protein precursor.
     
  0.900
OSB_18250
Tripartite ATP-independent periplasmic transporter, DctQ component.
 
     0.882
siaT_7
Sialic acid TRAP transporter permease protein SiaT.
 
  
 0.782
OSB_26170
Tripartite ATP-independent periplasmic transporter, DctQ component.
 
     0.768
OSB_07910
Tripartite ATP-independent periplasmic transporter, DctQ component.
 
     0.766
siaT_2
Sialic acid TRAP transporter permease protein SiaT.
 
  
 0.690
siaT_11
Sialic acid TRAP transporter permease protein SiaT.
 
  
 0.650
gstB_2
Glutathione S-transferase GstB; Belongs to the GST superfamily.
       0.545
limB
Limonene 1,2-monooxygenase.
  
     0.460
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.