STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB_19750Hypothetical protein. (158 aa)    
Predicted Functional Partners:
OSB_25650
Pectate lyase superfamily protein.
 
 
   0.728
OSB_31460
Core-2/I-Branching enzyme.
  
     0.715
OSB_01280
Hypothetical protein.
  
     0.688
OSB_20230
Hypothetical protein.
  
     0.667
OSB_10520
Type IV pilus biogenesis.
  
     0.662
ftsN
Cell division protein FtsN.
  
     0.658
OSB_31450
Sulfotransferase family protein.
  
     0.623
OSB_01290
Hypothetical protein.
  
     0.615
OSB_13320
Hypothetical protein.
  
     0.577
OSB_08720
Hypothetical protein.
  
     0.574
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.