STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtAMultidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (403 aa)    
Predicted Functional Partners:
ttgE
Toluene efflux pump membrane transporter TtgE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.975
OSB_00240
FtsX-like permease family protein.
  
 
 0.928
mdtC
Multidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.879
mexB
Multidrug resistance protein MexB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.865
OSB_29090
Multidrug resistance protein MdtN.
 
  
 0.734
OSB_11670
Outer membrane efflux protein.
  
 
 0.682
bepC
Outer membrane efflux protein BepC precursor.
  
 
 0.663
ttgI
Toluene efflux pump outer membrane protein TtgI precursor.
  
 
 0.642
rhtB_2
Homoserine/homoserine lactone efflux protein.
   
   0.574
clcB
Voltage-gated ClC-type chloride channel ClcB.
  
     0.515
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.