STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttgEToluene efflux pump membrane transporter TtgE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1250 aa)    
Predicted Functional Partners:
mdtA
Multidrug resistance protein MdtA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.975
ttgD
Toluene efflux pump periplasmic linker protein TtgD precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.868
OSB_11670
Outer membrane efflux protein.
  
 
 0.572
rhtB_2
Homoserine/homoserine lactone efflux protein.
       0.541
OSB_29090
Multidrug resistance protein MdtN.
 
   
 0.520
OSB_20070
Hypothetical protein.
       0.457
bamB
Outer membrane protein assembly factor BamB precursor.
   
   0.434
ttgI
Toluene efflux pump outer membrane protein TtgI precursor.
  
 
 0.407
bepC
Outer membrane efflux protein BepC precursor.
  
 
 0.402
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.