STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gfo_4Glucose--fructose oxidoreductase precursor. (376 aa)    
Predicted Functional Partners:
iolE_2
Inosose dehydratase.
  
 0.959
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.942
iolB
5-deoxy-glucuronate isomerase.
 
  
 0.942
iolC
5-dehydro-2-deoxygluconokinase.
    0.925
fba
Fructose-bisphosphate aldolase.
 
  
 0.811
ydgJ_2
Putative oxidoreductase YdgJ.
 
    
0.809
idhA
Inositol 2-dehydrogenase.
 
    
0.660
ycjS
Putative oxidoreductase YcjS.
  
     0.644
rbsR
Ribose operon repressor.
  
     0.627
gfo_2
Glucose--fructose oxidoreductase precursor.
  
     0.599
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.