STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB_27320Hypothetical protein. (197 aa)    
Predicted Functional Partners:
OSB_27340
Hypothetical protein.
 
     0.804
OSB_27350
Hypothetical protein; Aerotolerance regulator N-terminal.
 
     0.787
hyi
Hydroxypyruvate isomerase.
       0.783
OSB_27330
ATPase family associated with various cellular activities (AAA).
       0.727
OSB_27360
Hypothetical protein.
 
     0.720
OSB_31910
Putative NUDIX hydrolase.
      0.565
OSB_27300
Glyoxalase-like domain protein.
       0.518
OSB_27290
HTH domain protein.
       0.514
OSB_03860
Hypothetical protein; Belongs to the UPF0262 family.
  
     0.454
OSB_29290
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
       0.445
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.