STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actPCopper-transporting P-type ATPase. (722 aa)    
Predicted Functional Partners:
hmrR
HTH-type transcriptional regulator HmrR.
 
  
 0.913
pacS
Putative copper-transporting ATPase PacS.
 
 
0.898
csoR
Copper-sensing transcriptional repressor CsoR.
  
  
 0.826
arsC1
Arsenate-mycothiol transferase ArsC1; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.815
mco
Multicopper oxidase mco.
  
 
 0.783
dps
General stress protein 20U; Belongs to the Dps family.
  
  
 0.752
OSB_00440
Zinc transporter ZitB.
  
  
 0.743
kefC
Glutathione-regulated potassium-efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.734
OSB_28410
Methyltransferase domain protein.
  
  
 0.685
OSB_00500
Hypothetical protein.
 
   
 0.673
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.