STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB_27960Sulfite exporter TauE/SafE. (253 aa)    
Predicted Functional Partners:
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.779
pta
Phosphate acetyltransferase.
       0.776
nthB_1
Nitrile hydratase subunit beta.
  
     0.653
ttrA
Tetrathionate reductase subunit A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.652
xsc
Sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family.
 
     0.642
gabR
HTH-type transcriptional regulatory protein GabR.
 
   
 0.634
nthB_2
Nitrile hydratase subunit beta.
  
     0.514
OSB_29180
Hypothetical protein.
  
     0.506
OSB_28000
DMSO reductase anchor subunit (DmsC).
 
     0.503
tauA
Taurine-binding periplasmic protein precursor.
 
     0.457
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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