STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSB_29540Carbon monoxide dehydrogenase subunit G (CoxG). (150 aa)    
Predicted Functional Partners:
OSB_29580
VWA domain containing CoxE-like protein.
 
     0.892
coxL
Carbon monoxide dehydrogenase large chain.
  
 0.878
OSB_29590
AAA domain (dynein-related subfamily).
 
     0.859
coxM_2
Carbon monoxide dehydrogenase medium chain.
 
  
 0.841
cutL
Carbon monoxide dehydrogenase large chain.
  
 0.806
coxM_1
Carbon monoxide dehydrogenase medium chain.
 
  
 0.805
OSB_29530
XdhC and CoxI family protein.
       0.778
pucA_3
Putative xanthine dehydrogenase subunit A.
 
     0.719
rcoM_2
CO-responsive transcriptional regulator RcoM.
 
     0.677
nboR
Nicotine blue oxidoreductase.
       0.537
Your Current Organism:
Octadecabacter temperatus
NCBI taxonomy Id: 1458307
Other names: DSM 26878, LMG 27946, LMG:27946, O. temperatus, Octadecabacter sp. SB1, Octadecabacter temperatus Billerbeck et al. 2015, strain SB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.